Assalamualaikum, today we learn about Protein Data Bank (PDB) using RasWin software. It's quite complicated, but interesting. We can observe the structure of protein in 3D with different kind of display such as wireframe, backbone, ball&stick and etc. We can also customize the colour according to temperature, structure, shapely and etc.
The Protein Data Bank (PDB) is a repository for the 3-D structural data of large biological molecules, such as protein and nucleic acids. The data, typically obtained by X-ray crystallography or NMR spectroscopy and submitted by biologists and biochemists from around the world, are freely accessible on the Internet via the websites of its member organisations (PDBe, PDBj, and RCSB). The PDB is a key resource in areas of structural biology, such as structural genomic.
Structure of form III crystals of bovine pancreatic trypsin inhibitor.
| Authors | Wlodawer,A. |
| Classification | Proteinase Inhibitor (trypsin) |
| Compound | 1 Polymer 1 Ligands |
Crystal structure of PAS domain of HTR-like protein from Haloarcula marismortui.
| Authors | Ocipiuk, J. |
| Classification | Transferase |
| Compound | 1 Polymer 2 Ligands |
Crystal Structure of P Domain from Norwalk Virus Strain Vietnam 026 in complex with disordered HBGA type Lex
| Authors | Hansman, G.S |
| Classification | Viral protein |
| Compound | 1 Polymer 2 Ligands |
Crystal Structure of ATP-dependent Clp protease subunit P from Francisella tularensi.
| Authors | Kim, Y. |
| Classification | Hydrolase |
| Compound | 1 Polymer 5 Ligands |
Crystal structure of ClpP in tetradecameric form from Staphylococcus aureus
| Authors | Zhang, J. |
| Classification | Hydrolase |
| Compound | 1 Polymer |
